Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smpd1Q04519 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smpd1Q04519 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smpd1Q04519 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smpd1Q04519 Gm10231-201ENSMUST00000181584 441 ntBASIC19.21■□□□□ 0.67
Smpd1Q04519 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.21■□□□□ 0.67
Smpd1Q04519 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.21■□□□□ 0.67
Smpd1Q04519 Gm10175-202ENSMUST00000208752 441 ntBASIC19.21■□□□□ 0.67
Smpd1Q04519 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Gm30025-201ENSMUST00000218555 728 ntBASIC19.21■□□□□ 0.67
Smpd1Q04519 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smpd1Q04519 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smpd1Q04519 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.21■□□□□ 0.67
Smpd1Q04519 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smpd1Q04519 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smpd1Q04519 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.2■□□□□ 0.66
Smpd1Q04519 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smpd1Q04519 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.2■□□□□ 0.66
Smpd1Q04519 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.2■□□□□ 0.66
Smpd1Q04519 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smpd1Q04519 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smpd1Q04519 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.19■□□□□ 0.66
Smpd1Q04519 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.19■□□□□ 0.66
Smpd1Q04519 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.19■□□□□ 0.66
Smpd1Q04519 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.19■□□□□ 0.66
Smpd1Q04519 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smpd1Q04519 Gm19891-201ENSMUST00000189771 303 ntBASIC19.19■□□□□ 0.66
Smpd1Q04519 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.19■□□□□ 0.66
Smpd1Q04519 Gm3375-201ENSMUST00000203929 796 ntBASIC19.19■□□□□ 0.66
Smpd1Q04519 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smpd1Q04519 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Gm11539-201ENSMUST00000119837 557 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Gm13436-201ENSMUST00000120418 567 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.18■□□□□ 0.66
Smpd1Q04519 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.18■□□□□ 0.66
Smpd1Q04519 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Smpd1Q04519 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smpd1Q04519 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Smpd1Q04519 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smpd1Q04519 Gm13559-201ENSMUST00000120476 863 ntBASIC19.17■□□□□ 0.66
Smpd1Q04519 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Odf3b-204ENSMUST00000227834 930 ntBASIC19.17■□□□□ 0.66
Smpd1Q04519 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.17■□□□□ 0.66
Smpd1Q04519 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.17■□□□□ 0.66
Smpd1Q04519 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smpd1Q04519 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.17■□□□□ 0.66
Smpd1Q04519 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.17■□□□□ 0.66
Smpd1Q04519 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.16■□□□□ 0.66
Smpd1Q04519 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smpd1Q04519 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Timm23-208ENSMUST00000226683 750 ntBASIC19.16■□□□□ 0.66
Smpd1Q04519 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smpd1Q04519 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smpd1Q04519 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smpd1Q04519 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smpd1Q04519 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms