Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Gm7514-201ENSMUST00000209475 934 ntBASIC15.7■□□□□ 0.1
Atf1P81269 Gm10033-202ENSMUST00000211874 928 ntBASIC15.7■□□□□ 0.1
Atf1P81269 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Atf1P81269 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Atf1P81269 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Atf1P81269 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.69■□□□□ 0.1
Atf1P81269 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.69■□□□□ 0.1
Atf1P81269 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.69■□□□□ 0.1
Atf1P81269 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Atf1P81269 Gm18671-201ENSMUST00000214826 683 ntBASIC15.69■□□□□ 0.1
Atf1P81269 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.69■□□□□ 0.1
Atf1P81269 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Tgds-204ENSMUST00000228543 1594 ntBASIC15.69■□□□□ 0.1
Atf1P81269 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf1P81269 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.68■□□□□ 0.1
Atf1P81269 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atf1P81269 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.68■□□□□ 0.1
Atf1P81269 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.68■□□□□ 0.1
Atf1P81269 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atf1P81269 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Atf1P81269 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.68■□□□□ 0.1
Atf1P81269 Gm42642-201ENSMUST00000200683 355 ntBASIC15.68■□□□□ 0.1
Atf1P81269 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Atf1P81269 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf1P81269 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Atf1P81269 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Atf1P81269 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Gm22325-201ENSMUST00000158904 308 ntBASIC15.67■□□□□ 0.1
Atf1P81269 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.67■□□□□ 0.1
Atf1P81269 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Atf1P81269 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.67■□□□□ 0.1
Atf1P81269 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Atf1P81269 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Atf1P81269 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf1P81269 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Atf1P81269 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.66■□□□□ 0.1
Atf1P81269 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Atf1P81269 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.66■□□□□ 0.1
Atf1P81269 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf1P81269 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.65■□□□□ 0.1
Atf1P81269 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Atf1P81269 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Atf1P81269 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.65■□□□□ 0.1
Atf1P81269 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Atf1P81269 Gm5874-201ENSMUST00000096101 508 ntBASIC15.65■□□□□ 0.1
Atf1P81269 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf1P81269 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms