Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Rpl39P62892 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Rpl39P62892 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpl39P62892 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rpl39P62892 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpl39P62892 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpl39P62892 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpl39P62892 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.93□□□□□ -0.34
Rpl39P62892 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Rpl39P62892 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpl39P62892 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl39P62892 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpl39P62892 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.92□□□□□ -0.34
Rpl39P62892 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpl39P62892 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpl39P62892 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.92□□□□□ -0.34
Rpl39P62892 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.92□□□□□ -0.34
Rpl39P62892 Spcs1-204ENSMUST00000226782 949 ntBASIC12.92□□□□□ -0.34
Rpl39P62892 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.92□□□□□ -0.34
Rpl39P62892 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Rpl39P62892 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rpl39P62892 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl39P62892 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Rpl39P62892 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpl39P62892 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rpl39P62892 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.91□□□□□ -0.34
Rpl39P62892 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.91□□□□□ -0.34
Rpl39P62892 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rpl39P62892 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.91□□□□□ -0.34
Rpl39P62892 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Rpl39P62892 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl39P62892 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rpl39P62892 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl39P62892 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.9□□□□□ -0.34
Rpl39P62892 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms