Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Usp46P62069 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp46P62069 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp46P62069 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp46P62069 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp46P62069 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp46P62069 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Usp46P62069 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp46P62069 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.91■□□□□ 0.62
Usp46P62069 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp46P62069 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.91■□□□□ 0.62
Usp46P62069 Gm37444-201ENSMUST00000193605 439 ntBASIC18.91■□□□□ 0.62
Usp46P62069 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Usp46P62069 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp46P62069 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Zfp783-201ENSMUST00000095946 670 ntBASIC18.91■□□□□ 0.62
Usp46P62069 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp46P62069 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp46P62069 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp46P62069 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp46P62069 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp46P62069 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp46P62069 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Usp46P62069 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Usp46P62069 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.9■□□□□ 0.62
Usp46P62069 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp46P62069 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp46P62069 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp46P62069 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp46P62069 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp46P62069 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp46P62069 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp46P62069 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Usp46P62069 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.89■□□□□ 0.61
Usp46P62069 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.89■□□□□ 0.61
Usp46P62069 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.89■□□□□ 0.61
Usp46P62069 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp46P62069 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp46P62069 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp46P62069 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp46P62069 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp46P62069 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp46P62069 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.88■□□□□ 0.61
Usp46P62069 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.88■□□□□ 0.61
Usp46P62069 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.88■□□□□ 0.61
Usp46P62069 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.88■□□□□ 0.61
Usp46P62069 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp46P62069 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp46P62069 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp46P62069 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp46P62069 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp46P62069 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Usp46P62069 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Golph3-205ENSMUST00000228671 2842 ntBASIC18.86■□□□□ 0.61
Usp46P62069 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp46P62069 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.86■□□□□ 0.61
Usp46P62069 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp46P62069 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp46P62069 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp46P62069 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms