Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sssca1P56873 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sssca1P56873 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.65□□□□□ -0.06
Sssca1P56873 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.65□□□□□ -0.06
Sssca1P56873 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sssca1P56873 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Gm21956-201ENSMUST00000179946 522 ntBASIC14.65□□□□□ -0.06
Sssca1P56873 Gm38205-201ENSMUST00000192243 258 ntBASIC14.65□□□□□ -0.06
Sssca1P56873 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.65□□□□□ -0.06
Sssca1P56873 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.65□□□□□ -0.06
Sssca1P56873 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.65□□□□□ -0.06
Sssca1P56873 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sssca1P56873 Fst-202ENSMUST00000223640 2612 ntBASIC14.64□□□□□ -0.07
Sssca1P56873 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sssca1P56873 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.64□□□□□ -0.07
Sssca1P56873 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.64□□□□□ -0.07
Sssca1P56873 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sssca1P56873 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sssca1P56873 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sssca1P56873 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sssca1P56873 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sssca1P56873 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.63□□□□□ -0.07
Sssca1P56873 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.63□□□□□ -0.07
Sssca1P56873 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Sssca1P56873 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Sssca1P56873 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sssca1P56873 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sssca1P56873 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Sssca1P56873 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Sssca1P56873 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.62□□□□□ -0.07
Sssca1P56873 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.62□□□□□ -0.07
Sssca1P56873 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.62□□□□□ -0.07
Sssca1P56873 Gm40848-201ENSMUST00000221998 324 ntBASIC14.62□□□□□ -0.07
Sssca1P56873 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.62□□□□□ -0.07
Sssca1P56873 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sssca1P56873 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.62□□□□□ -0.07
Sssca1P56873 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.61□□□□□ -0.07
Sssca1P56873 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sssca1P56873 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Sssca1P56873 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sssca1P56873 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms