Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Atxn1P54254 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.96■□□□□ 0.47
Atxn1P54254 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.96■□□□□ 0.47
Atxn1P54254 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atxn1P54254 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atxn1P54254 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Atxn1P54254 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Gm23634-201ENSMUST00000175071 91 ntBASIC17.95■□□□□ 0.46
Atxn1P54254 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Atxn1P54254 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.95■□□□□ 0.46
Atxn1P54254 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.95■□□□□ 0.46
Atxn1P54254 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atxn1P54254 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atxn1P54254 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Atxn1P54254 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Atxn1P54254 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Atxn1P54254 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.94■□□□□ 0.46
Atxn1P54254 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atxn1P54254 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Atxn1P54254 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Atxn1P54254 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.93■□□□□ 0.46
Atxn1P54254 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Gm9103-201ENSMUST00000119371 405 ntBASIC17.93■□□□□ 0.46
Atxn1P54254 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.93■□□□□ 0.46
Atxn1P54254 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Atxn1P54254 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
Atxn1P54254 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Atxn1P54254 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atxn1P54254 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Atxn1P54254 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atxn1P54254 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.91■□□□□ 0.46
Atxn1P54254 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Atxn1P54254 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atxn1P54254 Gm33142-201ENSMUST00000193913 867 ntBASIC17.91■□□□□ 0.46
Atxn1P54254 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.91■□□□□ 0.46
Atxn1P54254 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.91■□□□□ 0.46
Atxn1P54254 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Atxn1P54254 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Atxn1P54254 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Atxn1P54254 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atxn1P54254 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Atxn1P54254 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atxn1P54254 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atxn1P54254 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.9■□□□□ 0.46
Atxn1P54254 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Atxn1P54254 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.9■□□□□ 0.46
Atxn1P54254 Gm11927-201ENSMUST00000118472 759 ntBASIC17.9■□□□□ 0.46
Atxn1P54254 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atxn1P54254 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Atxn1P54254 Gm6345-202ENSMUST00000180900 204 ntBASIC17.9■□□□□ 0.46
Atxn1P54254 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Atxn1P54254 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atxn1P54254 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atxn1P54254 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Atxn1P54254 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms