Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox1P53783 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sox1P53783 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Sox1P53783 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox1P53783 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox1P53783 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox1P53783 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.56■□□□□ 0.56
Sox1P53783 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox1P53783 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sox1P53783 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 Gm27389-201ENSMUST00000183622 195 ntBASIC18.55■□□□□ 0.56
Sox1P53783 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox1P53783 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.55■□□□□ 0.56
Sox1P53783 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Sox1P53783 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.54■□□□□ 0.56
Sox1P53783 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Sox1P53783 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox1P53783 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox1P53783 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox1P53783 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Sox1P53783 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sox1P53783 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox1P53783 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.53■□□□□ 0.56
Sox1P53783 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sox1P53783 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.52■□□□□ 0.56
Sox1P53783 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox1P53783 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox1P53783 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox1P53783 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sox1P53783 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox1P53783 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.52■□□□□ 0.56
Sox1P53783 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sox1P53783 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Sox1P53783 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.52■□□□□ 0.56
Sox1P53783 Birc2-201ENSMUST00000054878 378 ntBASIC18.52■□□□□ 0.56
Sox1P53783 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sox1P53783 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sox1P53783 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Sox1P53783 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sox1P53783 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox1P53783 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox1P53783 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox1P53783 Mir8098-201ENSMUST00000184011 137 ntBASIC18.51■□□□□ 0.55
Sox1P53783 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.51■□□□□ 0.55
Sox1P53783 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.51■□□□□ 0.55
Sox1P53783 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.51■□□□□ 0.55
Sox1P53783 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox1P53783 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox1P53783 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sox1P53783 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sox1P53783 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sox1P53783 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.5■□□□□ 0.55
Sox1P53783 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox1P53783 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sox1P53783 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms