Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Lhx3P50481 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lhx3P50481 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx3P50481 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx3P50481 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lhx3P50481 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lhx3P50481 Gm22240-201ENSMUST00000175225 82 ntBASIC18.4■□□□□ 0.54
Lhx3P50481 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lhx3P50481 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.4■□□□□ 0.54
Lhx3P50481 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.4■□□□□ 0.54
Lhx3P50481 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lhx3P50481 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Lhx3P50481 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lhx3P50481 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx3P50481 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.39■□□□□ 0.53
Lhx3P50481 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx3P50481 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lhx3P50481 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.39■□□□□ 0.53
Lhx3P50481 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.39■□□□□ 0.53
Lhx3P50481 Gm10138-203ENSMUST00000206952 366 ntBASIC18.39■□□□□ 0.53
Lhx3P50481 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx3P50481 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx3P50481 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx3P50481 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.39■□□□□ 0.53
Lhx3P50481 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lhx3P50481 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.39■□□□□ 0.53
Lhx3P50481 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lhx3P50481 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lhx3P50481 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lhx3P50481 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx3P50481 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx3P50481 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx3P50481 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.37■□□□□ 0.53
Lhx3P50481 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.37■□□□□ 0.53
Lhx3P50481 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lhx3P50481 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.37■□□□□ 0.53
Lhx3P50481 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx3P50481 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.37■□□□□ 0.53
Lhx3P50481 Gm10698-201ENSMUST00000182663 604 ntBASIC18.37■□□□□ 0.53
Lhx3P50481 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.37■□□□□ 0.53
Lhx3P50481 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.37■□□□□ 0.53
Lhx3P50481 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.37■□□□□ 0.53
Lhx3P50481 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.37■□□□□ 0.53
Lhx3P50481 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.37■□□□□ 0.53
Lhx3P50481 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lhx3P50481 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx3P50481 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx3P50481 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx3P50481 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.36■□□□□ 0.53
Lhx3P50481 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lhx3P50481 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lhx3P50481 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.35■□□□□ 0.53
Lhx3P50481 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Lhx3P50481 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx3P50481 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.35■□□□□ 0.53
Lhx3P50481 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx3P50481 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.35■□□□□ 0.53
Lhx3P50481 Gm15375-201ENSMUST00000119510 849 ntBASIC18.35■□□□□ 0.53
Lhx3P50481 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.35■□□□□ 0.53
Lhx3P50481 Mir2861-201ENSMUST00000175539 82 ntBASIC18.35■□□□□ 0.53
Lhx3P50481 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx3P50481 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lhx3P50481 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx3P50481 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx3P50481 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lhx3P50481 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Lhx3P50481 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Lhx3P50481 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.34■□□□□ 0.53
Lhx3P50481 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.34■□□□□ 0.53
Lhx3P50481 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.34■□□□□ 0.53
Lhx3P50481 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lhx3P50481 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms