Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Slc6a1P31648 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc6a1P31648 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.59■□□□□ 0.09
Slc6a1P31648 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Slc6a1P31648 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.58■□□□□ 0.09
Slc6a1P31648 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc6a1P31648 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Slc6a1P31648 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Slc6a1P31648 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.58■□□□□ 0.08
Slc6a1P31648 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc6a1P31648 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Slc6a1P31648 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Slc6a1P31648 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.57■□□□□ 0.08
Slc6a1P31648 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Mir7075-201ENSMUST00000184187 82 ntBASIC15.57■□□□□ 0.08
Slc6a1P31648 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.57■□□□□ 0.08
Slc6a1P31648 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Gm6139-201ENSMUST00000079261 882 ntBASIC15.57■□□□□ 0.08
Slc6a1P31648 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Slc6a1P31648 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.57■□□□□ 0.08
Slc6a1P31648 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.57■□□□□ 0.08
Slc6a1P31648 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc6a1P31648 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Slc6a1P31648 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Slc6a1P31648 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Slc6a1P31648 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.56■□□□□ 0.08
Slc6a1P31648 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Slc6a1P31648 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Slc6a1P31648 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc6a1P31648 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc6a1P31648 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.55■□□□□ 0.08
Slc6a1P31648 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.55■□□□□ 0.08
Slc6a1P31648 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.55■□□□□ 0.08
Slc6a1P31648 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Slc6a1P31648 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.55■□□□□ 0.08
Slc6a1P31648 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a1P31648 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Slc6a1P31648 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Slc6a1P31648 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.54■□□□□ 0.08
Slc6a1P31648 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a1P31648 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a1P31648 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Slc6a1P31648 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Slc6a1P31648 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Slc6a1P31648 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.54■□□□□ 0.08
Slc6a1P31648 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a1P31648 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms