Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.47■□□□□ 0.71
Mmp3P28862 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Mmp3P28862 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.47■□□□□ 0.71
Mmp3P28862 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp3P28862 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Mmp3P28862 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp3P28862 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp3P28862 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Mmp3P28862 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Mmp3P28862 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp3P28862 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp3P28862 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.45■□□□□ 0.7
Mmp3P28862 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.45■□□□□ 0.7
Mmp3P28862 Gm13836-201ENSMUST00000121159 501 ntBASIC19.45■□□□□ 0.7
Mmp3P28862 Gm12382-201ENSMUST00000122005 922 ntBASIC19.45■□□□□ 0.7
Mmp3P28862 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.45■□□□□ 0.7
Mmp3P28862 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.45■□□□□ 0.7
Mmp3P28862 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Gm5417-201ENSMUST00000079706 384 ntBASIC19.45■□□□□ 0.7
Mmp3P28862 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.45■□□□□ 0.7
Mmp3P28862 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.45■□□□□ 0.7
Mmp3P28862 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp3P28862 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Mmp3P28862 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Mmp3P28862 Mir2861-201ENSMUST00000175539 82 ntBASIC19.44■□□□□ 0.7
Mmp3P28862 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.44■□□□□ 0.7
Mmp3P28862 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.44■□□□□ 0.7
Mmp3P28862 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Mmp3P28862 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Mmp3P28862 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp3P28862 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.44■□□□□ 0.7
Mmp3P28862 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Mmp3P28862 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.44■□□□□ 0.7
Mmp3P28862 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Mmp3P28862 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.43■□□□□ 0.7
Mmp3P28862 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Mmp3P28862 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.43■□□□□ 0.7
Mmp3P28862 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.43■□□□□ 0.7
Mmp3P28862 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.43■□□□□ 0.7
Mmp3P28862 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp3P28862 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Mmp3P28862 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp3P28862 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Mmp3P28862 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Mmp3P28862 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.41■□□□□ 0.7
Mmp3P28862 Gm21814-202ENSMUST00000203277 873 ntBASIC19.41■□□□□ 0.7
Mmp3P28862 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.41■□□□□ 0.7
Mmp3P28862 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp3P28862 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp3P28862 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp3P28862 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.4■□□□□ 0.7
Mmp3P28862 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms