Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.6■□□□□ 0.57
Hmga1P17095 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmga1P17095 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.6■□□□□ 0.57
Hmga1P17095 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.6■□□□□ 0.57
Hmga1P17095 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hmga1P17095 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmga1P17095 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hmga1P17095 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hmga1P17095 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hmga1P17095 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmga1P17095 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.59■□□□□ 0.57
Hmga1P17095 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmga1P17095 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmga1P17095 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmga1P17095 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmga1P17095 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmga1P17095 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Hmga1P17095 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.58■□□□□ 0.56
Hmga1P17095 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmga1P17095 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Hmga1P17095 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.58■□□□□ 0.56
Hmga1P17095 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Hmga1P17095 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hmga1P17095 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmga1P17095 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga1P17095 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga1P17095 Gm15565-201ENSMUST00000118890 427 ntBASIC18.57■□□□□ 0.56
Hmga1P17095 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga1P17095 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Hmga1P17095 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmga1P17095 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmga1P17095 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.57■□□□□ 0.56
Hmga1P17095 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hmga1P17095 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmga1P17095 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.56■□□□□ 0.56
Hmga1P17095 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hmga1P17095 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmga1P17095 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.55■□□□□ 0.56
Hmga1P17095 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hmga1P17095 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Hmga1P17095 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmga1P17095 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Hmga1P17095 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmga1P17095 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmga1P17095 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmga1P17095 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Hmga1P17095 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.54■□□□□ 0.56
Hmga1P17095 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmga1P17095 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmga1P17095 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.53■□□□□ 0.56
Hmga1P17095 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Gm12382-201ENSMUST00000122005 922 ntBASIC18.53■□□□□ 0.56
Hmga1P17095 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms