Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.3■□□□□ 0.04
Ifna1P01572 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.29■□□□□ 0.04
Ifna1P01572 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.29■□□□□ 0.04
Ifna1P01572 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Mir7075-201ENSMUST00000184187 82 ntBASIC15.29■□□□□ 0.04
Ifna1P01572 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.29■□□□□ 0.04
Ifna1P01572 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ifna1P01572 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ifna1P01572 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ifna1P01572 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ifna1P01572 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ifna1P01572 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.27■□□□□ 0.04
Ifna1P01572 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.27■□□□□ 0.04
Ifna1P01572 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.27■□□□□ 0.04
Ifna1P01572 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ifna1P01572 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Ifna1P01572 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ifna1P01572 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ifna1P01572 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ifna1P01572 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ifna1P01572 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ifna1P01572 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ifna1P01572 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.26■□□□□ 0.03
Ifna1P01572 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.26■□□□□ 0.03
Ifna1P01572 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.26■□□□□ 0.03
Ifna1P01572 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.26■□□□□ 0.03
Ifna1P01572 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.26■□□□□ 0.03
Ifna1P01572 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Ifna1P01572 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ifna1P01572 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.25■□□□□ 0.03
Ifna1P01572 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.25■□□□□ 0.03
Ifna1P01572 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ifna1P01572 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ifna1P01572 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.25■□□□□ 0.03
Ifna1P01572 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Ifna1P01572 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Ifna1P01572 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ifna1P01572 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ifna1P01572 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ifna1P01572 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ifna1P01572 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms