Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Becn1O88597 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Becn1O88597 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.74■□□□□ 0.91
Becn1O88597 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Becn1O88597 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Becn1O88597 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Becn1O88597 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Becn1O88597 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Becn1O88597 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Becn1O88597 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Becn1O88597 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.73■□□□□ 0.91
Becn1O88597 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.73■□□□□ 0.91
Becn1O88597 Gm45417-201ENSMUST00000209533 758 ntBASIC20.73■□□□□ 0.91
Becn1O88597 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Becn1O88597 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Becn1O88597 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.73■□□□□ 0.91
Becn1O88597 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Becn1O88597 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.73■□□□□ 0.91
Becn1O88597 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Becn1O88597 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Becn1O88597 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.72■□□□□ 0.91
Becn1O88597 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.72■□□□□ 0.91
Becn1O88597 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Becn1O88597 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Becn1O88597 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.71■□□□□ 0.91
Becn1O88597 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Becn1O88597 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.7■□□□□ 0.9
Becn1O88597 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Becn1O88597 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Becn1O88597 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
Becn1O88597 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
Becn1O88597 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Becn1O88597 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Becn1O88597 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Becn1O88597 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.68■□□□□ 0.9
Becn1O88597 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.68■□□□□ 0.9
Becn1O88597 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Becn1O88597 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.68■□□□□ 0.9
Becn1O88597 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms