Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Itgb3O54890 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.22■□□□□ 0.67
Itgb3O54890 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Itgb3O54890 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.21■□□□□ 0.67
Itgb3O54890 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb3O54890 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Itgb3O54890 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Itgb3O54890 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb3O54890 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb3O54890 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.21■□□□□ 0.67
Itgb3O54890 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.21■□□□□ 0.67
Itgb3O54890 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.21■□□□□ 0.67
Itgb3O54890 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb3O54890 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.21■□□□□ 0.67
Itgb3O54890 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Itgb3O54890 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb3O54890 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Itgb3O54890 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Itgb3O54890 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Itgb3O54890 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.2■□□□□ 0.66
Itgb3O54890 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Itgb3O54890 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.2■□□□□ 0.66
Itgb3O54890 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Itgb3O54890 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itgb3O54890 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itgb3O54890 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itgb3O54890 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Itgb3O54890 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.19■□□□□ 0.66
Itgb3O54890 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.19■□□□□ 0.66
Itgb3O54890 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.19■□□□□ 0.66
Itgb3O54890 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.19■□□□□ 0.66
Itgb3O54890 Gm10698-201ENSMUST00000182663 604 ntBASIC19.19■□□□□ 0.66
Itgb3O54890 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.19■□□□□ 0.66
Itgb3O54890 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.19■□□□□ 0.66
Itgb3O54890 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.19■□□□□ 0.66
Itgb3O54890 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itgb3O54890 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itgb3O54890 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Itgb3O54890 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Itgb3O54890 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Itgb3O54890 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.18■□□□□ 0.66
Itgb3O54890 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.18■□□□□ 0.66
Itgb3O54890 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Itgb3O54890 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Itgb3O54890 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.17■□□□□ 0.66
Itgb3O54890 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Itgb3O54890 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Itgb3O54890 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Itgb3O54890 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Itgb3O54890 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Itgb3O54890 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Itgb3O54890 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.16■□□□□ 0.66
Itgb3O54890 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Itgb3O54890 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Itgb3O54890 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Itgb3O54890 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Itgb3O54890 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.15■□□□□ 0.66
Itgb3O54890 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Itgb3O54890 Gm15378-201ENSMUST00000121894 207 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms