Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ChkaO54804 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.29■□□□□ 0.52
ChkaO54804 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ChkaO54804 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ChkaO54804 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ChkaO54804 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 Gm7514-201ENSMUST00000209475 934 ntBASIC18.28■□□□□ 0.52
ChkaO54804 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 Gm5874-201ENSMUST00000096101 508 ntBASIC18.28■□□□□ 0.52
ChkaO54804 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ChkaO54804 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.27■□□□□ 0.52
ChkaO54804 Gm15039-201ENSMUST00000118914 875 ntBASIC18.27■□□□□ 0.52
ChkaO54804 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ChkaO54804 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.27■□□□□ 0.52
ChkaO54804 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ChkaO54804 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.27■□□□□ 0.52
ChkaO54804 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
ChkaO54804 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ChkaO54804 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ChkaO54804 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ChkaO54804 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ChkaO54804 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.26■□□□□ 0.51
ChkaO54804 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ChkaO54804 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ChkaO54804 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
ChkaO54804 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ChkaO54804 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ChkaO54804 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.25■□□□□ 0.51
ChkaO54804 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.25■□□□□ 0.51
ChkaO54804 Gm22325-201ENSMUST00000158904 308 ntBASIC18.25■□□□□ 0.51
ChkaO54804 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ChkaO54804 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.25■□□□□ 0.51
ChkaO54804 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ChkaO54804 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChkaO54804 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChkaO54804 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ChkaO54804 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
ChkaO54804 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ChkaO54804 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.24■□□□□ 0.51
ChkaO54804 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ChkaO54804 Gm42642-201ENSMUST00000200683 355 ntBASIC18.24■□□□□ 0.51
ChkaO54804 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.24■□□□□ 0.51
ChkaO54804 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChkaO54804 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ChkaO54804 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.23■□□□□ 0.51
ChkaO54804 Gm10849-201ENSMUST00000100397 618 ntBASIC18.23■□□□□ 0.51
ChkaO54804 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
ChkaO54804 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.23■□□□□ 0.51
ChkaO54804 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.23■□□□□ 0.51
ChkaO54804 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
ChkaO54804 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
ChkaO54804 Gm18671-201ENSMUST00000214826 683 ntBASIC18.23■□□□□ 0.51
ChkaO54804 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms