Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sptlc1O35704 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sptlc1O35704 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sptlc1O35704 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sptlc1O35704 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sptlc1O35704 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sptlc1O35704 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sptlc1O35704 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sptlc1O35704 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sptlc1O35704 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sptlc1O35704 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.83■□□□□ 0.77
Sptlc1O35704 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.83■□□□□ 0.77
Sptlc1O35704 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sptlc1O35704 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sptlc1O35704 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sptlc1O35704 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sptlc1O35704 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.83■□□□□ 0.76
Sptlc1O35704 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sptlc1O35704 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sptlc1O35704 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sptlc1O35704 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sptlc1O35704 Iqck-206ENSMUST00000208658 2891 ntBASIC19.82■□□□□ 0.76
Sptlc1O35704 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.82■□□□□ 0.76
Sptlc1O35704 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.82■□□□□ 0.76
Sptlc1O35704 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Sptlc1O35704 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Sptlc1O35704 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sptlc1O35704 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Gm6433-201ENSMUST00000118634 875 ntBASIC19.81■□□□□ 0.76
Sptlc1O35704 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sptlc1O35704 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sptlc1O35704 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.81■□□□□ 0.76
Sptlc1O35704 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sptlc1O35704 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.8■□□□□ 0.76
Sptlc1O35704 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.8■□□□□ 0.76
Sptlc1O35704 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.8■□□□□ 0.76
Sptlc1O35704 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.8■□□□□ 0.76
Sptlc1O35704 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.8■□□□□ 0.76
Sptlc1O35704 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.8■□□□□ 0.76
Sptlc1O35704 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sptlc1O35704 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sptlc1O35704 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.79■□□□□ 0.76
Sptlc1O35704 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.79■□□□□ 0.76
Sptlc1O35704 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sptlc1O35704 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC19.79■□□□□ 0.76
Sptlc1O35704 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sptlc1O35704 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sptlc1O35704 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.78■□□□□ 0.76
Sptlc1O35704 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.78■□□□□ 0.76
Sptlc1O35704 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.78■□□□□ 0.76
Sptlc1O35704 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sptlc1O35704 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Sptlc1O35704 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Gm12382-201ENSMUST00000122005 922 ntBASIC19.77■□□□□ 0.76
Sptlc1O35704 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Sptlc1O35704 Gm10231-201ENSMUST00000181584 441 ntBASIC19.77■□□□□ 0.76
Sptlc1O35704 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sptlc1O35704 Gm10175-202ENSMUST00000208752 441 ntBASIC19.77■□□□□ 0.76
Sptlc1O35704 Gm30025-201ENSMUST00000218555 728 ntBASIC19.77■□□□□ 0.76
Sptlc1O35704 Odf3b-204ENSMUST00000227834 930 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms