Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfrsf11bO08712 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Gm18671-201ENSMUST00000214826 683 ntBASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfrsf11bO08712 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfrsf11bO08712 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tnfrsf11bO08712 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tnfrsf11bO08712 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Tnfrsf11bO08712 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf11bO08712 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf11bO08712 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf11bO08712 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfrsf11bO08712 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tnfrsf11bO08712 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Gm42642-201ENSMUST00000200683 355 ntBASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfrsf11bO08712 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf11bO08712 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms