Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav13d-3J3QMG8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-3J3QMG8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Gm26524-201ENSMUST00000192339 390 ntBASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-3J3QMG8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-3J3QMG8 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Trav13d-3J3QMG8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms