Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Gm10138-203ENSMUST00000206952 366 ntBASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb9E9Q5G2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb9E9Q5G2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb9E9Q5G2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb9E9Q5G2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb9E9Q5G2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Pcdhb9E9Q5G2 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.35■■□□□ 1.01
Pcdhb9E9Q5G2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Pcdhb9E9Q5G2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhb9E9Q5G2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb9E9Q5G2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Gm15375-201ENSMUST00000119510 849 ntBASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdhb9E9Q5G2 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Fst-202ENSMUST00000223640 2612 ntBASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb9E9Q5G2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Gm15378-201ENSMUST00000121894 207 ntBASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb9E9Q5G2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb9E9Q5G2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms