Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-2D3Z4R4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx6-2D3Z4R4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-2D3Z4R4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-2D3Z4R4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-2D3Z4R4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-2D3Z4R4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx6-2D3Z4R4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkx6-2D3Z4R4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Nkx6-2D3Z4R4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-2D3Z4R4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-2D3Z4R4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-2D3Z4R4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx6-2D3Z4R4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.77□□□□□ -0.05
Nkx6-2D3Z4R4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx6-2D3Z4R4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Nkx6-2D3Z4R4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx6-2D3Z4R4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.77□□□□□ -0.05
Nkx6-2D3Z4R4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx6-2D3Z4R4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Gm14523-201ENSMUST00000117260 558 ntBASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-2D3Z4R4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nkx6-2D3Z4R4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-2D3Z4R4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms