Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Gm40848-201ENSMUST00000221998 324 ntBASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Trav12d-1A0N8R0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Gm12821-201ENSMUST00000120022 600 ntBASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-1A0N8R0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav12d-1A0N8R0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-1A0N8R0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Gm6139-201ENSMUST00000079261 882 ntBASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav12d-1A0N8R0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12d-1A0N8R0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms