Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-3A0A140T8Q0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Igkv3-3A0A140T8Q0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm5953-201ENSMUST00000220644 2616 ntBASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm9885-202ENSMUST00000186234 2209 ntBASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC10.96□□□□□ -0.66
Igkv3-3A0A140T8Q0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm10571-201ENSMUST00000097869 1638 ntBASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm44832-201ENSMUST00000208849 2303 ntBASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-3A0A140T8Q0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC10.94□□□□□ -0.66
Igkv3-3A0A140T8Q0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Igkv3-3A0A140T8Q0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC10.93□□□□□ -0.66
Igkv3-3A0A140T8Q0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms