Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gm10493-201ENSMUST00000097270 612 ntBASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpl23a-ps3A0A140T8M7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms