Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10493-201ENSMUST00000097270 612 ntBASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15d-2-dv6d-2A0A0G2JGQ7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6420-201ENSMUST00000193885 723 ntBASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nespas-201ENSMUST00000143738 1083 ntBASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms