Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm26524-201ENSMUST00000192339 390 ntBASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Rab3c-203ENSMUST00000224180 967 ntBASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.12□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm20760-201ENSMUST00000179197 648 ntBASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms