Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm42545-201ENSMUST00000202755 922 ntBASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.72■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.71■□□□□ 0.27
Ighv1-43A0A0A6YXN5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm37292-201ENSMUST00000192062 758 ntBASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-43A0A0A6YXN5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms