Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm28557A0A087WQQ0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Gm26833-201ENSMUST00000180899 440 ntBASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm28557A0A087WQQ0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm28557A0A087WQQ0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Gm6139-201ENSMUST00000079261 882 ntBASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm28557A0A087WQQ0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm28557A0A087WQQ0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28557A0A087WQQ0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28557A0A087WQQ0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28557A0A087WQQ0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28557A0A087WQQ0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm28557A0A087WQQ0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Gm28557A0A087WQQ0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Gm27454-201ENSMUST00000185090 204 ntBASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms