Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-5A0A075B6B5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-5A0A075B6B5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-5A0A075B6B5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-5A0A075B6B5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-5A0A075B6B5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-5A0A075B6B5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6-5A0A075B6B5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-5A0A075B6B5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.04□□□□□ -0.16
Trav6-5A0A075B6B5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-5A0A075B6B5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.02□□□□□ -0.16
Trav6-5A0A075B6B5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6-5A0A075B6B5 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms