Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-4A0A075B6B4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Gm5408-201ENSMUST00000197998 747 ntBASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-4A0A075B6B4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Gm13148-201ENSMUST00000118892 745 ntBASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav6-4A0A075B6B4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-4A0A075B6B4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-4A0A075B6B4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-4A0A075B6B4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-4A0A075B6B4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-4A0A075B6B4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-4A0A075B6B4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-4A0A075B6B4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms