Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Trav12d-3A0A075B6A4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-3A0A075B6A4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-3A0A075B6A4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav12d-3A0A075B6A4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-3A0A075B6A4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-3A0A075B6A4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Trav12d-3A0A075B6A4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-3A0A075B6A4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-3A0A075B6A4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-3A0A075B6A4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-3A0A075B6A4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms