Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm43173-201ENSMUST00000202246 593 ntBASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.83□□□□□ -0.03
Trav15-2-dv6-2A0A075B650 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm8493-201ENSMUST00000196881 489 ntBASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Tgds-204ENSMUST00000228543 1594 ntBASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav15-2-dv6-2A0A075B650 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms