Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Trav13-1A0A075B644 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Gm20049-201ENSMUST00000219950 730 ntBASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13-1A0A075B644 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Gm12527-201ENSMUST00000117967 564 ntBASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13-1A0A075B644 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13-1A0A075B644 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Trmt13-210ENSMUST00000198454 880 ntBASIC12.85□□□□□ -0.35
Trav13-1A0A075B644 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms