Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Gm45444-201ENSMUST00000211394 898 ntBASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav4d-3A0A075B625 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Serp2-204ENSMUST00000228055 705 ntBASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4d-3A0A075B625 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Nsd1-203ENSMUST00000224156 1149 ntBASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4d-3A0A075B625 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Trav4d-3A0A075B625 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Trav4d-3A0A075B625 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Haglr-201ENSMUST00000100000 2085 ntBASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4d-3A0A075B625 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms