Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Fst-202ENSMUST00000223640 2612 ntBASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm38205-201ENSMUST00000192243 258 ntBASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav15d-1-dv6d-1A0A075B624 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms