Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-1A0A075B606 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13d-1A0A075B606 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav13d-1A0A075B606 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Gm22240-201ENSMUST00000175225 82 ntBASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Gm8520-201ENSMUST00000186517 868 ntBASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Trmt13-210ENSMUST00000198454 880 ntBASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav13d-1A0A075B606 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-1A0A075B606 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Gm13168-201ENSMUST00000121771 632 ntBASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Gm37856-201ENSMUST00000191634 999 ntBASIC13.25□□□□□ -0.29
Trav13d-1A0A075B606 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms