Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-6A0A075B603 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-6A0A075B603 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Gm12821-201ENSMUST00000120022 600 ntBASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Gm11421-201ENSMUST00000122124 294 ntBASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Mir7075-201ENSMUST00000184187 82 ntBASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-6A0A075B603 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-6A0A075B603 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-6A0A075B603 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-6A0A075B603 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms