Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav5-1A0A075B5Z7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm15378-201ENSMUST00000121894 207 ntBASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav5-1A0A075B5Z7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav5-1A0A075B5Z7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav5-1A0A075B5Z7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav5-1A0A075B5Z7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Trav5-1A0A075B5Z7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav5-1A0A075B5Z7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav5-1A0A075B5Z7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav5-1A0A075B5Z7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Mir6349-201ENSMUST00000184059 97 ntBASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav5-1A0A075B5Z7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms