Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.75□□□□□ -1.49
H3f3aP84244 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
H3f3aP84244 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3f3aP84244 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H3f3aP84244 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm23884-201ENSMUST00000122687 294 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.74□□□□□ -1.49
H3f3aP84244 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm43849-201ENSMUST00000201086 215 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm9788-201ENSMUST00000057038 906 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.74□□□□□ -1.49
H3f3aP84244 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
H3f3aP84244 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
H3f3aP84244 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Mir678-201ENSMUST00000102114 84 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm23768-201ENSMUST00000104440 131 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm6654-201ENSMUST00000118950 348 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm11445-201ENSMUST00000119101 532 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm14531-201ENSMUST00000120845 285 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.73□□□□□ -1.49
H3f3aP84244 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm12504-202ENSMUST00000148026 306 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm25374-201ENSMUST00000158158 101 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm9127-201ENSMUST00000188041 985 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm37103-201ENSMUST00000191830 115 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm45196-201ENSMUST00000206751 825 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Gm2225-201ENSMUST00000209570 377 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
H3f3aP84244 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm15732-201ENSMUST00000079794 480 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.73□□□□□ -1.49
H3f3aP84244 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
H3f3aP84244 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
H3f3aP84244 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
H3f3aP84244 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms