Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox3P53784 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox3P53784 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sox3P53784 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox3P53784 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Mir678-201ENSMUST00000102114 84 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Sox3P53784 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Sox3P53784 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Gm6446-201ENSMUST00000120604 818 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm16248-201ENSMUST00000124238 243 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.25□□□□□ -1.41
Sox3P53784 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Gm24719-201ENSMUST00000157520 110 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Sox3P53784 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm27512-201ENSMUST00000175328 126 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm26509-201ENSMUST00000180947 948 ntBASIC6.25□□□□□ -1.41
Sox3P53784 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Gm28023-201ENSMUST00000184556 60 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm27825-201ENSMUST00000184586 60 ntBASIC6.25□□□□□ -1.41
Sox3P53784 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm42814-201ENSMUST00000199370 460 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm43141-201ENSMUST00000199695 274 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.25□□□□□ -1.41
Sox3P53784 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.25□□□□□ -1.41
Sox3P53784 Gm9315-201ENSMUST00000222696 908 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm7252-201ENSMUST00000223284 456 ntBASIC6.25□□□□□ -1.41
Sox3P53784 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.25□□□□□ -1.41
Sox3P53784 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox3P53784 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox3P53784 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox3P53784 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox3P53784 Gm21731-201ENSMUST00000079524 489 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox3P53784 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sox3P53784 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox3P53784 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.25□□□□□ -1.41
Sox3P53784 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sox3P53784 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Mir697-201ENSMUST00000102316 109 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Gm24434-201ENSMUST00000104081 132 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Snora35-201ENSMUST00000104579 128 ntBASIC6.24□□□□□ -1.41
Sox3P53784 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.24□□□□□ -1.41
Sox3P53784 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.24□□□□□ -1.41
Sox3P53784 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.24□□□□□ -1.41
Sox3P53784 Snora47-201ENSMUST00000157483 138 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Gm22529-201ENSMUST00000158817 123 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Gm25675-201ENSMUST00000174979 118 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.24□□□□□ -1.41
Sox3P53784 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.24□□□□□ -1.41
Sox3P53784 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.24□□□□□ -1.41
Sox3P53784 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.24□□□□□ -1.41
Sox3P53784 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Gm3511-201ENSMUST00000199823 204 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.24□□□□□ -1.41
Sox3P53784 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Gm43867-201ENSMUST00000203860 525 ntBASIC6.24□□□□□ -1.41
Sox3P53784 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Gm35619-201ENSMUST00000222548 600 ntBASIC6.24□□□□□ -1.41
Sox3P53784 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.24□□□□□ -1.41
Sox3P53784 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.24□□□□□ -1.41
Sox3P53784 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.24□□□□□ -1.41
Sox3P53784 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox3P53784 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox3P53784 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.24□□□□□ -1.41
Sox3P53784 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Sox3P53784 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox3P53784 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sox3P53784 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Sox3P53784 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms