Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lire1P11260 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lire1P11260 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm12710-201ENSMUST00000119011 216 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm13900-201ENSMUST00000119402 498 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm14957-201ENSMUST00000121069 817 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm14990-201ENSMUST00000122354 445 ntBASIC6.44□□□□□ -1.38
Lire1P11260 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.44□□□□□ -1.38
Lire1P11260 Gm24735-201ENSMUST00000158859 118 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm19480-201ENSMUST00000185547 667 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm29781-201ENSMUST00000203862 478 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm44192-201ENSMUST00000204195 556 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.44□□□□□ -1.38
Lire1P11260 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm18562-201ENSMUST00000209949 915 ntBASIC6.44□□□□□ -1.38
Lire1P11260 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.44□□□□□ -1.38
Lire1P11260 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.44□□□□□ -1.38
Lire1P11260 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lire1P11260 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Lire1P11260 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Lire1P11260 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Lire1P11260 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.44□□□□□ -1.38
Lire1P11260 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.44□□□□□ -1.38
Lire1P11260 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Lire1P11260 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.44□□□□□ -1.38
Lire1P11260 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Lire1P11260 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Lire1P11260 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.43□□□□□ -1.38
Lire1P11260 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Lire1P11260 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Lire1P11260 Gm25311-201ENSMUST00000104136 132 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm13732-201ENSMUST00000117753 535 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm15188-201ENSMUST00000121264 704 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm23855-201ENSMUST00000158377 135 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm16138-201ENSMUST00000159341 821 ntBASIC6.43□□□□□ -1.38
Lire1P11260 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm27972-201ENSMUST00000184720 137 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm18501-201ENSMUST00000185363 664 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.43□□□□□ -1.38
Lire1P11260 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.43□□□□□ -1.38
Lire1P11260 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.43□□□□□ -1.38
Lire1P11260 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Lire1P11260 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Lire1P11260 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Lire1P11260 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Lire1P11260 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.43□□□□□ -1.38
Lire1P11260 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms