Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm12328-201ENSMUST00000118611 197 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Olfr1564-203ENSMUST00000213642 5271 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Olfr1564-205ENSMUST00000215450 5281 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm25278-201ENSMUST00000157267 120 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm25439-201ENSMUST00000158280 131 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm9429-201ENSMUST00000117804 868 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm11447-201ENSMUST00000118983 858 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm22870-201ENSMUST00000157501 112 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm27834-201ENSMUST00000183427 125 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm37770-201ENSMUST00000192855 772 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm7733-201ENSMUST00000199038 919 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a3E9PWQ3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm43254-201ENSMUST00000199187 2491 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm25178-201ENSMUST00000122633 325 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm18343-201ENSMUST00000172802 604 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm25748-201ENSMUST00000175487 70 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28604-201ENSMUST00000186629 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28566-201ENSMUST00000186714 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms