Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm15901-201ENSMUST00000117663 941 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm18833-201ENSMUST00000173218 862 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm8604-201ENSMUST00000183150 965 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm27409-201ENSMUST00000184727 80 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC152394.1-201ENSMUST00000227360 1086 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm5702-201ENSMUST00000185629 2469 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm14521-201ENSMUST00000119545 350 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm22599-201ENSMUST00000157597 132 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm26086-201ENSMUST00000157902 263 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm22917-201ENSMUST00000180116 110 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm17988-201ENSMUST00000208796 535 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm38244-201ENSMUST00000191737 2586 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.82□□□□□ -1.48
Col6a6Q8C6K9 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm36930-201ENSMUST00000195431 2376 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm24989-201ENSMUST00000104461 88 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm8317-201ENSMUST00000121261 471 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Mir3090-201ENSMUST00000175597 87 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm5947-201ENSMUST00000179156 714 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Gm5645-201ENSMUST00000179597 714 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Mir6992-201ENSMUST00000183342 109 ntBASIC5.81□□□□□ -1.48
Col6a6Q8C6K9 Mir6367-201ENSMUST00000183385 102 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms