Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox3P53784 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.29□□□□□ -1.4
Sox3P53784 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Sox3P53784 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Sox3P53784 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm8250-201ENSMUST00000117398 774 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm13930-201ENSMUST00000118569 368 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm15311-201ENSMUST00000119682 282 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm15305-201ENSMUST00000120354 288 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.29□□□□□ -1.4
Sox3P53784 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.29□□□□□ -1.4
Sox3P53784 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Gm23757-201ENSMUST00000158353 100 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm26557-201ENSMUST00000180756 493 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm27299-201ENSMUST00000184593 103 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm28353-201ENSMUST00000186482 570 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm28533-201ENSMUST00000186741 570 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm43392-201ENSMUST00000196560 434 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.29□□□□□ -1.4
Sox3P53784 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm7492-201ENSMUST00000201745 725 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.29□□□□□ -1.4
Sox3P53784 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sox3P53784 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.29□□□□□ -1.4
Sox3P53784 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sox3P53784 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Sox3P53784 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Gm24048-201ENSMUST00000102411 106 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.28□□□□□ -1.4
Sox3P53784 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm24176-201ENSMUST00000158928 121 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm23810-201ENSMUST00000175150 74 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Gm27295-201ENSMUST00000184264 153 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Gm28665-201ENSMUST00000189269 670 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm7769-201ENSMUST00000212900 933 ntBASIC6.28□□□□□ -1.4
Sox3P53784 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.28□□□□□ -1.4
Sox3P53784 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Gm24621-201ENSMUST00000082679 140 ntBASIC6.28□□□□□ -1.4
Sox3P53784 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Sox3P53784 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Sox3P53784 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sox3P53784 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sox3P53784 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sox3P53784 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms