Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm12936-201ENSMUST00000121439 301 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Gm23276-201ENSMUST00000157913 138 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Gm23546-201ENSMUST00000158211 137 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm26381-201ENSMUST00000174895 92 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm18352-201ENSMUST00000189113 902 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Gm37681-201ENSMUST00000193880 727 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 AC164164.2-201ENSMUST00000221809 785 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 AC131745.2-201ENSMUST00000225736 565 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 n-R5s46-201ENSMUST00000083960 116 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col18a1P39061 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col18a1P39061 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Col18a1P39061 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm25345-201ENSMUST00000104505 133 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm15766-201ENSMUST00000118025 813 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Gm8534-201ENSMUST00000118553 766 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Gm6744-201ENSMUST00000119303 543 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm43946-201ENSMUST00000204058 886 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC8.59□□□□□ -1.03
Col18a1P39061 AC132918.1-201ENSMUST00000227877 925 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 AC122858.1-202ENSMUST00000228290 986 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Col18a1P39061 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Gm36936-201ENSMUST00000194508 2749 ntBASIC8.59□□□□□ -1.03
Col18a1P39061 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC8.59□□□□□ -1.03
Col18a1P39061 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col18a1P39061 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC8.59□□□□□ -1.04
Col18a1P39061 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Col18a1P39061 Gm7171-201ENSMUST00000177413 1349 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Gm13930-201ENSMUST00000118569 368 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm11835-201ENSMUST00000120635 663 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-7-201ENSMUST00000180364 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-6-201ENSMUST00000196127 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-12-201ENSMUST00000197274 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-5-201ENSMUST00000197439 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-10-201ENSMUST00000197745 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-11-201ENSMUST00000197952 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-4-201ENSMUST00000198665 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-9-201ENSMUST00000200087 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Mir669a-8-201ENSMUST00000200268 87 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm5306-201ENSMUST00000203325 757 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Gm4587-201ENSMUST00000209135 637 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 AC153870.1-201ENSMUST00000219599 560 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Col18a1P39061 AC163664.2-201ENSMUST00000228894 459 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Col18a1P39061 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Col18a1P39061 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.58□□□□□ -1.04
Col18a1P39061 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col18a1P39061 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms