Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm34005-201ENSMUST00000215834 282 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 AC140930.4-201ENSMUST00000220750 150 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 AC140462.1-201ENSMUST00000225776 853 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm24826-201ENSMUST00000083695 215 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11977-201ENSMUST00000118511 1461 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm44224-201ENSMUST00000204131 1463 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Crbn-201ENSMUST00000013882 2072 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43209-201ENSMUST00000198949 1588 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43420-201ENSMUST00000198012 1857 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Slc24a2-201ENSMUST00000044990 2218 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37630-201ENSMUST00000194210 1456 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Reg3a-201ENSMUST00000101272 825 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm9050-201ENSMUST00000119501 448 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm25842-201ENSMUST00000122590 322 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm16373-201ENSMUST00000129517 303 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm22484-201ENSMUST00000157992 306 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Slc15a2-205ENSMUST00000164579 1068 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11107-201ENSMUST00000165414 505 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm9613-201ENSMUST00000171662 196 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm29563-201ENSMUST00000187249 496 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm18291-201ENSMUST00000190791 301 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37155-201ENSMUST00000192152 406 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm18402-201ENSMUST00000203834 586 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm29759-201ENSMUST00000205860 327 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm42402-201ENSMUST00000208341 1054 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 AC153662.1-201ENSMUST00000222220 270 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 AC173481.1-201ENSMUST00000223351 270 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 AC154484.2-201ENSMUST00000228359 818 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Mbl2-201ENSMUST00000025797 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm9845-201ENSMUST00000056409 598 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Snora61-201ENSMUST00000083015 130 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm24043-201ENSMUST00000083108 116 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm23345-201ENSMUST00000083817 150 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37959-201ENSMUST00000191700 2897 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms