Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm11318-201ENSMUST00000118640 961 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm14521-201ENSMUST00000119545 350 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm12399-201ENSMUST00000121475 446 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm11545-201ENSMUST00000146507 375 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm23050-201ENSMUST00000158775 165 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm26057-201ENSMUST00000178099 165 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm5306-201ENSMUST00000203325 757 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm5418-201ENSMUST00000206932 528 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 AC122371.2-201ENSMUST00000220583 366 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col16a1Q8BLX7 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm25919-201ENSMUST00000104271 132 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm22952-201ENSMUST00000116720 120 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm22932-201ENSMUST00000175510 72 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 AC153357.1-201ENSMUST00000219190 482 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm5832-201ENSMUST00000121704 1582 ntBASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col16a1Q8BLX7 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm15096-201ENSMUST00000121918 878 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm3650-201ENSMUST00000180600 747 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm29813-201ENSMUST00000195856 447 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm8863-201ENSMUST00000216630 926 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 AC110381.1-201ENSMUST00000218987 586 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Gm37589-201ENSMUST00000193609 3994 ntBASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col16a1Q8BLX7 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Gm7205-201ENSMUST00000196032 1323 ntBASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Col16a1Q8BLX7 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col16a1Q8BLX7 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col16a1Q8BLX7 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Col16a1Q8BLX7 Gm13245-201ENSMUST00000119646 260 ntBASIC8.39□□□□□ -1.07
Col16a1Q8BLX7 Gm12768-201ENSMUST00000120055 759 ntBASIC8.39□□□□□ -1.07
Col16a1Q8BLX7 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col16a1Q8BLX7 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms