Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.6□□□□□ -1.35
HttP42859 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HttP42859 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.6□□□□□ -1.35
HttP42859 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.6□□□□□ -1.35
HttP42859 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Gm26376-201ENSMUST00000104784 110 ntBASIC6.6□□□□□ -1.35
HttP42859 Gm5406-201ENSMUST00000120054 766 ntBASIC6.6□□□□□ -1.35
HttP42859 Rab26os-201ENSMUST00000176215 477 ntBASIC6.6□□□□□ -1.35
HttP42859 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.6□□□□□ -1.35
HttP42859 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC6.6□□□□□ -1.35
HttP42859 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.59□□□□□ -1.35
HttP42859 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 Gm5436-201ENSMUST00000058103 643 ntBASIC6.59□□□□□ -1.35
HttP42859 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.59□□□□□ -1.35
HttP42859 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.59□□□□□ -1.35
HttP42859 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
HttP42859 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HttP42859 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.59□□□□□ -1.35
HttP42859 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HttP42859 Gm12937-201ENSMUST00000118333 448 ntBASIC6.59□□□□□ -1.35
HttP42859 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.59□□□□□ -1.35
HttP42859 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.59□□□□□ -1.35
HttP42859 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.59□□□□□ -1.35
HttP42859 Gm22867-201ENSMUST00000157499 109 ntBASIC6.59□□□□□ -1.35
HttP42859 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.59□□□□□ -1.35
HttP42859 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 Gm37758-201ENSMUST00000194275 629 ntBASIC6.59□□□□□ -1.35
HttP42859 Gm37774-201ENSMUST00000194401 245 ntBASIC6.59□□□□□ -1.35
HttP42859 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.59□□□□□ -1.35
HttP42859 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HttP42859 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HttP42859 Gm8039-201ENSMUST00000204758 712 ntBASIC6.59□□□□□ -1.35
HttP42859 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.59□□□□□ -1.35
HttP42859 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.59□□□□□ -1.35
HttP42859 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.59□□□□□ -1.35
HttP42859 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.59□□□□□ -1.35
HttP42859 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HttP42859 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HttP42859 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HttP42859 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HttP42859 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HttP42859 Gm11805-201ENSMUST00000121238 600 ntBASIC6.59□□□□□ -1.36
HttP42859 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HttP42859 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Gm21735-201ENSMUST00000190360 696 ntBASIC6.59□□□□□ -1.36
HttP42859 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.59□□□□□ -1.36
HttP42859 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.59□□□□□ -1.36
HttP42859 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.59□□□□□ -1.36
HttP42859 Gm9386-201ENSMUST00000095195 381 ntBASIC6.59□□□□□ -1.36
HttP42859 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
HttP42859 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.58□□□□□ -1.36
HttP42859 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.58□□□□□ -1.36
HttP42859 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.58□□□□□ -1.36
HttP42859 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HttP42859 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HttP42859 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
HttP42859 Gm13259-201ENSMUST00000120792 456 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms