Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nkx3-1P97436 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Nkx3-1P97436 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Nkx3-1P97436 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm23485-201ENSMUST00000104181 155 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm26422-201ENSMUST00000104276 132 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm5319-201ENSMUST00000118965 873 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm12244-201ENSMUST00000119500 291 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm9005-201ENSMUST00000119908 607 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm22552-201ENSMUST00000157796 337 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm17137-202ENSMUST00000165729 957 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm9027-201ENSMUST00000165914 661 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm8192-201ENSMUST00000182196 958 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm27653-201ENSMUST00000185037 136 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm43233-201ENSMUST00000200491 616 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm5055-201ENSMUST00000215697 581 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm22053-201ENSMUST00000083394 200 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx3-1P97436 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Nkx3-1P97436 AC135083.2-201ENSMUST00000228599 1456 ntBASIC5.71□□□□□ -1.5
Nkx3-1P97436 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm5702-201ENSMUST00000185629 2469 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm13265-201ENSMUST00000118090 421 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm13835-201ENSMUST00000118459 685 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm14745-201ENSMUST00000118480 1096 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm5809-201ENSMUST00000121854 529 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm15300-201ENSMUST00000122324 279 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm25219-201ENSMUST00000157545 330 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm23896-201ENSMUST00000158109 130 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Mir6348-201ENSMUST00000183804 120 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm36935-201ENSMUST00000192526 292 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm37135-201ENSMUST00000192652 534 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm34768-201ENSMUST00000193884 565 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Gm44361-201ENSMUST00000197960 94 ntBASIC5.7□□□□□ -1.5
Nkx3-1P97436 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms