Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.6□□□□□ -1.19
Col1a1P11087 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm38322-201ENSMUST00000194074 2300 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm12193-201ENSMUST00000117250 379 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Gm12768-201ENSMUST00000120055 759 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm22690-201ENSMUST00000175054 110 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Gm27006-201ENSMUST00000182218 943 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm18781-201ENSMUST00000211252 924 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.6□□□□□ -1.19
Col1a1P11087 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
Col1a1P11087 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
Col1a1P11087 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Col1a1P11087 Gm43181-201ENSMUST00000197001 2072 ntBASIC7.6□□□□□ -1.19
Col1a1P11087 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
Col1a1P11087 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm8692-201ENSMUST00000118102 438 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm16074-201ENSMUST00000119524 444 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.59□□□□□ -1.19
Col1a1P11087 Gm37376-201ENSMUST00000192176 453 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm7626-201ENSMUST00000195801 353 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.59□□□□□ -1.19
Col1a1P11087 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 AC122393.2-201ENSMUST00000226404 1093 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 AC124709.3-201ENSMUST00000227294 171 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.59□□□□□ -1.19
Col1a1P11087 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col1a1P11087 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.59□□□□□ -1.19
Col1a1P11087 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col1a1P11087 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Col1a1P11087 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Col1a1P11087 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Col1a1P11087 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.59□□□□□ -1.2
Col1a1P11087 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Col1a1P11087 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Grik1-210ENSMUST00000228034 2708 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.58□□□□□ -1.2
Col1a1P11087 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Col1a1P11087 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Col1a1P11087 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col1a1P11087 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms