Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Ccdc38Q8CDN8 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ccdc38Q8CDN8 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Ccdc38Q8CDN8 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Ccdc38Q8CDN8 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Ccdc38Q8CDN8 Gm21955-201ENSMUST00000194137 4968 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm45424-201ENSMUST00000210575 3300 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm15316-201ENSMUST00000121082 421 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Mir1981-201ENSMUST00000157934 82 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm44370-201ENSMUST00000175436 112 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Mir7011-201ENSMUST00000183768 73 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Mir6348-201ENSMUST00000183804 120 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm8506-201ENSMUST00000186661 829 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm38328-201ENSMUST00000195582 317 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm4042-201ENSMUST00000216946 637 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm37880-201ENSMUST00000192216 3257 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ccdc38Q8CDN8 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Snord88a-201ENSMUST00000116723 90 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm12135-201ENSMUST00000119170 466 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm11434-201ENSMUST00000122379 629 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm22702-201ENSMUST00000175372 69 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm7463-201ENSMUST00000201541 547 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm24621-201ENSMUST00000082679 140 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ccdc38Q8CDN8 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc38Q8CDN8 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc38Q8CDN8 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC7.31□□□□□ -1.24
Ccdc38Q8CDN8 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ccdc38Q8CDN8 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ccdc38Q8CDN8 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ccdc38Q8CDN8 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms